Orti F, Fernández ML, Marino-Buslje C. (2024). MLOsMetaDB, a meta-database to centralize the information on liquid–liquid phase separation proteins and membraneless organelles. Protein Science, 33(1). https://doi.org/10.1002/pro.4858 Pubmed
Bertran-Alamillo J, Giménez-Capitán A, Román R, Talbot S, Whiteley R, Floc'h N, Martínez-Pérez E, Martin MJ, Smith PD, Sullivan I, Terp MG, Saeh J, Marino-Buslje C, Fabbri G, Guo G, Xu M, Tornador C, Aguilar-Hernández A, Reguart N, Ditzel HJ, Martínez-Bueno A, Nabau-Moretó N, Gascó A, Rosell R, Pease JE, Polanska UM, Travers J, Urosevic J, Molina-Vila MA. BID expression determines the apoptotic fate of cancer cells after abrogation of the spindle assembly checkpoint by AURKB or TTK inhibitors. Molecular Cancer. 22(1):110 (2023). doi: 10.1186/s12943-023-01815-w. PubMed
Martínez-Pérez E, Pajkos M, Tosatto SCE, Gibson TJ, Dosztanyi Z, Marino-Buslje C. Pipeline for transferring annotations between proteins beyond globular domains. Protein Sci. 32(7):e4655 (2023). doi: 10.1002/pro.4655. PubMed
Piovesan D, Del Conte A, Clementel D, Monzon AM, Bevilacqua M, Aspromonte MC, Iserte JA, Orti FE, Marino-Buslje C, Tosatto SCE. MobiDB: 10 years of intrinsically disordered proteins. Nucleic Acids Res. 51(D1):D438-D444. (2023). doi: 10.1093/nar/gkac1065. PubMed
Zea DJ, Teppa E, Marino-Buslje C. Easy Not Easy: Comparative Modeling with High-Sequence Identity Templates. Methods Mol Biol. 2627:83-100 (2023). doi: 10.1007/978-1-0716-2974-1_5. PubMed Protocol
Fernandez-Acosta M, Romero JI, Bernabó G, Velázquez-Campos GM, Gonzalez N, Mares ML, Werbajh S, Avendaño-Vázquez LA, Rechberger GN, Kühnlein RP, Marino-Buslje C, Cantera R, Rezaval C, Ceriani MF. orsai, the Drosophila homolog of human ETFRF1, links lipid catabolism to growth control. BMC Biol. 20(1):233 (2022). doi: 10.1186/s12915-022-01417-w. PubMed
Hurley MJ, Urra C, Garduno BM, Bruno A, Kimbell A, Wilkinson B, Marino-Buslje C, Ezquer M, Ezquer F, Aburto PF, Poulin E, Vasquez RA, Deacon R, Avila A, Altimiras F, Whitney Vanderklish P, Zampieri G, Angione C, Constantino G, Holmes TC, Coba MP, Xu X, Cogram P. Genome Sequencing Variations in the Octodon degus, an Unconventional Natural Model of Aging and Alzheimer's Disease. Front Aging Neurosci. 14:894994 (2022). doi: 10.3389/fnagi.2022.894994. PubMed
Navarro AM, Orti F, Martínez-Pérez E, Alonso M, Simonetti FL, Iserte JA, Marino-Buslje C. DisPhaseDB: An integrative database of diseases related variations in liquid-liquid phase separation proteins. Comput Struct Biotechnol J. 20:2551-2557 (2022). doi: 10.1016/j.csbj.2022.05.004. PubMed
Quaglia F, Mészáros B, Salladini E, Hatos A, Pancsa R, Chemes LB, Pajkos M, Lazar T, Peña-Díaz S, Santos J, Ács V, Farahi N, Fichó E, Aspromonte MC, Bassot C, Chasapi A, Davey NE, Davidovi? R, Dobson L, Elofsson A, Erd?s G, Gaudet P, Giglio M, Glavina J, Iserte J, Iglesias V, Kálmán Z, Lambrughi M, Leonardi E, Longhi S, Macedo-Ribeiro S, Maiani E, Marchetti J, Marino-Buslje C, Mészáros A, Monzon AM, Minervini G, Nadendla S, Nilsson JF, Novotný M, Ouzounis CA, Palopoli N, Papaleo E, Pereira PJB, Pozzati G, Promponas VJ, Pujols J, Rocha ACS, Salas M, Sawicki LR, Schad E, Shenoy A, Szaniszló T, Tsirigos KD, Veljkovic N, Parisi G, Ventura S, Dosztányi Z, Tompa P, Tosatto SCE, Piovesan D. DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic Acids Res. 50(D1):D480-D487 (2022). doi: 10.1093/nar/gkab1082. PubMed
Lazar T, Martínez-Pérez E, Quaglia F, Hatos A, Chemes LB, Iserte JA, Méndez NA, Garrone NA, Saldaño TE, Marchetti J, Rueda AJV, Bernadó P, Blackledge M, Cordeiro TN, Fagerberg E, Forman-Kay JD, Fornasari MS, Gibson TJ, Gomes GW, Gradinaru CC, Head-Gordon T, Jensen MR, Lemke EA, Longhi S, Marino-Buslje C, Minervini G, Mittag T, Monzon AM, Pappu RV, Parisi G, Ricard-Blum S, Ruff KM, Salladini E, Skepö M, Svergun D, Vallet SD, Varadi M, Tompa P, Tosatto SCE, Piovesan D. PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins. Nucleic Acids Res. 49(D1):D404-D411 (2021). doi: 10.1093/nar/gkaa1021. PubMed
Martínez-Pérez E, Molina-Vila MA, Marino-Buslje C. Panels and models for accurate prediction of tumor mutation burden in tumor samples. NPJ Precis Oncol. 5(1):31 (2021). doi: 10.1038/s41698-021-00169-0. PubMed
Necci M, Piovesan D, CAID Predictors; DisProt Curators, Tosatto SCE, Marino Buslje C, et al. Critical assessment of protein intrinsic disorder prediction. Nat Methods. 18(5):472-481 (2021). doi: 10.1038/s41592-021-01117-3. PubMed
Orti F, Navarro AM, Rabinovich A, Wodak SJ, Marino-Buslje C. Insight into membraneless organelles and their associated proteins: Drivers, Clients and Regulators. Comput Struct Biotechnol J. 19:3964-3977 (2021). doi: 10.1016/j.csbj.2021.06.042 PubMed
García Bossi J, Kumar K, Barberini ML, Domínguez GD, Rondón Guerrero YDC, Marino-Buslje C, Obertello M, Muschietti JP, Estevez JM. The role of P-type IIA (ECA) and P-type IIB (ACA) Ca2+-ATPases in plant development and growth. J Exp Bot. 71(4):1239-1248 (2020). doi: 10.1093/jxb/erz521. PubMed
Hatos A, Hajdu-Soltész B, Monzon AM, Palopoli N, Álvarez L, Aykac-Fas B, Bassot C, Benítez GI, Bevilacqua M, Chasapi A, Chemes L, Davey NE, Davidovi? R, Dunker AK, Elofsson A, Gobeill J, Foutel NSG, Sudha G, Guharoy M, Horvath T, Iglesias V, Kajava AV, Kovacs OP, Lamb J, Lambrughi M, Lazar T, Leclercq JY, Leonardi E, Macedo-Ribeiro S, Macossay-Castillo M, Maiani E, Manso JA, Marino-Buslje C, Martínez-Pérez E, Mészáros B, Mi?eti? I, Minervini G, Murvai N, Necci M, Ouzounis CA, Pajkos M, Paladin L, Pancsa R, Papaleo E, Parisi G, Pasche E, Barbosa Pereira PJ, Promponas VJ, Pujols J, Quaglia F, Ruch P, Salvatore M, Schad E, Szabo B, Szaniszló T, Tamana S, Tantos A, Veljkovic N, Ventura S, Vranken W, Dosztányi Z, Tompa P, Tosatto SCE, Piovesan D. DisProt: intrinsic protein disorder annotation in 2020. Nucleic Acids Res. 48(D1):D269-D276 (2020). doi: 10.1093/nar/gkz975. PubMed